- Predicted Gene MLOC_76388
MLOC_76388 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.97726 | 7.5564 | 7.61284 | 7.05016 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.66541 | 9.08417 | 10.1818 | 7.24264 |
| INF1 | Young developing inflorescences (5mm) | 12.4307 | 12.9953 | 12.7166 | 10.3592 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.591 | 13.3506 | 13.9444 | 14.2127 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.06213 | 8.95188 | 8 | 9.59972 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.19431 | 6.3914 | 8.79733 | 22.2583 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.31884 | 6.69738 | 7.23805 | 6.48465 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.64161 | 1.51394 | 1.33023 | 3.46431 |
CDS Structure of MLOC_76388
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_76388.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g10820.1 |
-3 |
3e-169 |
490 |
238/262 (91%) |
13102.m01210 protein Sel1 repeat domain containing protein, putative, expressed |
| TAIR PP10 |
AT2G25570.3 |
-3 |
2e-121 |
367 |
173/245 (71%) |
binding | chr2:10885881-10887842 REVERSE LENGTH=288 |
