MLOC_76384 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.861737.497353.654735.80265
LEAShoots from the seedlings (10 cm shoot stage)7.888124.928742.927654.12098
INF1Young developing inflorescences (5mm)5.076593.643922.791522.99352
INF2Developing inflorescences (1-1.5 cm)2.46752.900892.374892.53281
ROORoots from the seedlings (10 cm shoot stage)21.726224.530874.871528.6178
NODDeveloping tillers at six leaf stage, 3rd internode0.374840.505960.1392191.11967
CAR5Developing grain, bracts removed (5 DPA)2.482421.756521.955511.73528
CAR15Developing grain, bracts removed (15 DPA)1.626611.665851.916633.40875



CDS Structure of MLOC_76384






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76384.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76384.1CUST_16297_PI427708080AvailableAvailablecontig_71199 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g21418.1 -2 4e-96 325 183/371 (49%) 13110.m07736 protein NADPH-dependent oxidoreductase, putative
TAIR PP10 ATMG00665.1 -2 0.0 711 379/400 (95%) | Symbols: NAD5B, NAD5.2, NAD5 | NADH dehydrogenase 5B | chrM:190740-190761 REVERSE LENGTH=669