MLOC_76376 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.032283.622166.171794.65078
LEAShoots from the seedlings (10 cm shoot stage)3.626714.012175.111372.90974
INF1Young developing inflorescences (5mm)1.061321.587211.760360.941312
INF2Developing inflorescences (1-1.5 cm)0.4168071.336621.459251.0006
ROORoots from the seedlings (10 cm shoot stage)11.37227.594127.606388.11076
NODDeveloping tillers at six leaf stage, 3rd internode2.53234.380575.6575512.3277
CAR5Developing grain, bracts removed (5 DPA)1.020471.271531.113850.912843
CAR15Developing grain, bracts removed (15 DPA)0.6252840.7835350.555031.36013



CDS Structure of MLOC_76376






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76376.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76376.1CUST_16294_PI427708080AvailableAvailablecontig_7117 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g49150.1 +3 1e-66 212 100/113 (88%) 13106.m05247 protein exostosin, putative, expressed
TAIR PP10 AT3G55830.1 +3 2e-49 166 76/113 (67%) | Symbols: EPC1 | Nucleotide-diphospho-sugar transferases superfamily protein | chr3:20715101-20717133 FORWARD LENGTH=334