MLOC_76374 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.2645350.5254950.5347130.413491
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)00.075544500.348727
NODDeveloping tillers at six leaf stage, 3rd internode00.06403890.1361740.367082
CAR5Developing grain, bracts removed (5 DPA)00.13250900.157452
CAR15Developing grain, bracts removed (15 DPA)0.4909840.4983460.2433540.955579



CDS Structure of MLOC_76374






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76374.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76374.2CUST_16293_PI427708080AvailableAvailablecontig_71153 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g07200.1 +3 3e-49 165 82/167 (49%) 13109.m00564 protein transposon protein, putative, unclassified
TAIR PP10 AT4G38180.1 +3 3e-21 86 52/169 (31%) | Symbols: FRS5 | FAR1-related sequence 5 | chr4:17906702-17909404 REVERSE LENGTH=788