MLOC_76355 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.345224.481322.854320.9254
LEAShoots from the seedlings (10 cm shoot stage)14.726111.267211.681510.1533
INF1Young developing inflorescences (5mm)49.022851.618442.447137.158
INF2Developing inflorescences (1-1.5 cm)27.830432.728329.813830.5914
ROORoots from the seedlings (10 cm shoot stage)16.052821.92219.231322.4227
NODDeveloping tillers at six leaf stage, 3rd internode1.772562.993619.5201312.042
CAR5Developing grain, bracts removed (5 DPA)28.728229.928130.901226.4119
CAR15Developing grain, bracts removed (15 DPA)5.992175.540415.1302911.9682



CDS Structure of MLOC_76355






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76355.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370904NoneNoneNoneNone
MLOC_76355.1CUST_6569_PI427708080AvailableAvailablecontig_7108 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g04660.1 +2 0.0 1184 569/638 (89%) 13102.m00489 protein arginine N-methyltransferase 5, putative, expressed
TAIR PP10 AT4G31120.1 +2 0.0 935 460/648 (71%) | Symbols: SKB1, ATPRMT5 | SHK1 binding protein 1 | chr4:15132185-15136568 REVERSE LENGTH=642