MLOC_76354 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.730846.823538.170738.23935
LEAShoots from the seedlings (10 cm shoot stage)10.07474.29893.978855.50171
INF1Young developing inflorescences (5mm)16.536111.739514.517913.9104
INF2Developing inflorescences (1-1.5 cm)13.200611.835613.005716.2373
ROORoots from the seedlings (10 cm shoot stage)4.8289812.931610.107216.3392
NODDeveloping tillers at six leaf stage, 3rd internode4.836323.42386.9674113.8191
CAR5Developing grain, bracts removed (5 DPA)8.156287.6911110.680410.4235
CAR15Developing grain, bracts removed (15 DPA)6.764654.036465.6868714.3708



CDS Structure of MLOC_76354






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76354.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76354.2CUST_13257_PI427708083AvailableAvailablecontig_710783 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g23160.1 +1 9e-42 146 75/80 (94%) 13106.m02488 protein bacterial transferase hexapeptide domain containing protein, expressed
TAIR PP10 AT5G19485.1 +1 3e-32 119 61/80 (76%) transferases;nucleotidyltransferases | chr5:6573907-6576352 REVERSE LENGTH=456