MLOC_76303 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.43384.668624.126564.87022
LEAShoots from the seedlings (10 cm shoot stage)1.065163.743486.639593.30753
INF1Young developing inflorescences (5mm)2.089162.563671.748871.94692
INF2Developing inflorescences (1-1.5 cm)0.8629420.7398280.5250130.849572
ROORoots from the seedlings (10 cm shoot stage)15.844613.824111.963616.4377
NODDeveloping tillers at six leaf stage, 3rd internode2.322251.238240.1058833.10152
CAR5Developing grain, bracts removed (5 DPA)0.3099590.2437120.4113530.33767
CAR15Developing grain, bracts removed (15 DPA)0.1806490.06973340.2303080.382801



CDS Structure of MLOC_76303






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76303.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367115NoneNoneNoneNone
MLOC_76303.1CUST_6564_PI427708080AvailableAvailablecontig_70900 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g35040.1 +3 0.0 660 336/431 (78%) 13111.m03409 protein aminotransferase, classes I and II, domain containing protein, expressed
TAIR PP10 AT5G36160.1 +3 9e-150 442 227/415 (55%) Tyrosine transaminase family protein | chr5:14233261-14235129 REVERSE LENGTH=420