MLOC_76301 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.3272710.515713.56311.1614
LEAShoots from the seedlings (10 cm shoot stage)12.38868.931449.015558.56319
INF1Young developing inflorescences (5mm)27.722430.509133.188426.8144
INF2Developing inflorescences (1-1.5 cm)30.0322.750718.960728.449
ROORoots from the seedlings (10 cm shoot stage)11.488912.44439.8564914.8838
NODDeveloping tillers at six leaf stage, 3rd internode0.3557981.120912.177033.90735
CAR5Developing grain, bracts removed (5 DPA)12.396111.576516.168914.2042
CAR15Developing grain, bracts removed (15 DPA)3.523853.621463.374299.02683



CDS Structure of MLOC_76301






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76301.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76301.1CUST_13254_PI427708083AvailableAvailablecontig_709 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g11020.1 +2 9e-26 102 46/52 (88%) 13111.m01169 protein DAG protein, chloroplast precursor, putative, expressed
TAIR PP10 AT1G11430.1 +2 5e-14 67 30/47 (64%) plastid developmental protein DAG, putative | chr1:3847273-3848938 FORWARD LENGTH=232