MLOC_76284 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.471456.32073.884455.54571
LEAShoots from the seedlings (10 cm shoot stage)10.81617.112674.499256.11446
INF1Young developing inflorescences (5mm)5.308053.776692.969523.32814
INF2Developing inflorescences (1-1.5 cm)1.943132.756351.850462.37529
ROORoots from the seedlings (10 cm shoot stage)14.663115.844830.685518.627
NODDeveloping tillers at six leaf stage, 3rd internode0.3542470.2137410.05693280.512964
CAR5Developing grain, bracts removed (5 DPA)2.057011.265551.296621.40805
CAR15Developing grain, bracts removed (15 DPA)1.828071.14621.188213.29406



CDS Structure of MLOC_76284






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76284.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76284.1CUST_16280_PI427708080AvailableAvailablecontig_70838 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g34094.1 -2 9e-80 266 161/161 (100%) 13112.m08818 protein NADH-ubiquinone oxidoreductase chain 4, putative
TAIR PP10 ATMG00580.1 -2 3e-79 270 168/200 (84%) | Symbols: NAD4 | NADH dehydrogenase subunit 4 | chrM:161693-169674 FORWARD LENGTH=495