MLOC_76269 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3449690.4907710.4101220.417662
LEAShoots from the seedlings (10 cm shoot stage)0.8501450.2015410.2512040.346307
INF1Young developing inflorescences (5mm)0.039466700.04944550.0493584
INF2Developing inflorescences (1-1.5 cm)00.02042710.02448950.0493078
ROORoots from the seedlings (10 cm shoot stage)1.123930.7081440.5493980.731959
NODDeveloping tillers at six leaf stage, 3rd internode0.2500680.3409380.05312240.67313
CAR5Developing grain, bracts removed (5 DPA)0.0538820.2322820.05005670.123822
CAR15Developing grain, bracts removed (15 DPA)1.572921.490931.439523.84097



CDS Structure of MLOC_76269






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76269.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360625NoneNoneNoneNone
MLOC_76269.1CUST_6560_PI427708080AvailableAvailablecontig_70752 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g10960.1 +1 0.0 621 388/584 (66%) 13101.m01183 protein peptide-N4-asparagine amidase A, putative
TAIR PP10 AT3G14920.1 +1 2e-113 356 200/501 (40%) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein | chr3:5018275-5020104 FORWARD LENGTH=609