MLOC_76233 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1007640.3192760.3046840.263319
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.0355154000.032589
INF2Developing inflorescences (1-1.5 cm)0.03697570.035326700.0516928
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode000.01251890.0271308
CAR5Developing grain, bracts removed (5 DPA)0.04554290.08584010.04404410.062196
CAR15Developing grain, bracts removed (15 DPA)160.081158.688148.176391.553



CDS Structure of MLOC_76233






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76233.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76233.2CUST_10189_PI427708083AvailableAvailablecontig_70630 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g19150.1 -3 6e-169 480 240/319 (75%) 13105.m02022 protein hydrolase, alpha/beta fold family domain containing protein, expressed
TAIR PP10 AT4G02340.1 -3 6e-129 377 177/316 (56%) alpha/beta-Hydrolases superfamily protein | chr4:1035722-1037403 FORWARD LENGTH=324