- Predicted Gene MLOC_76230
MLOC_76230 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.4301 | 1.56025 | 1.65336 | 2.09178 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.2411 | 29.094 | 25.4264 | 21.5823 |
INF1 | Young developing inflorescences (5mm) | 3.91895 | 4.30062 | 4.3755 | 4.21403 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.05361 | 2.28641 | 1.9178 | 2.78268 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.24865 | 2.29183 | 3.11117 | 3.75298 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.06461 | 2.48813 | 3.75697 | 9.64187 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.4593 | 3.68172 | 4.09379 | 4.54592 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.00969 | 3.37788 | 2.36899 | 7.56194 |
CDS Structure of MLOC_76230
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_76230.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
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Rice PP6 |
LOC_Os01g09430.1 |
-3 |
0.0 |
523 |
247/270 (91%) |
13101.m01002 protein expressed protein |
TAIR PP10 |
AT3G21360.1 |
-3 |
1e-160 |
456 |
212/270 (79%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:7522865-7524036 FORWARD LENGTH=330 |