MLOC_76216 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.592575.110424.094394.76295
LEAShoots from the seedlings (10 cm shoot stage)6.311233.979292.380343.49457
INF1Young developing inflorescences (5mm)10.354510.85629.889117.96212
INF2Developing inflorescences (1-1.5 cm)7.848777.140766.8137.46826
ROORoots from the seedlings (10 cm shoot stage)15.358210.038520.996713.401
NODDeveloping tillers at six leaf stage, 3rd internode0.2904920.1109150.1092390.34673
CAR5Developing grain, bracts removed (5 DPA)1.75692.214331.723311.75076
CAR15Developing grain, bracts removed (15 DPA)0.8469941.006661.05281.94364



CDS Structure of MLOC_76216






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76216.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76216.1CUST_16269_PI427708080AvailableAvailablecontig_70567 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g57990.1 -3 1e-86 284 147/150 (98%) 13101.m06157 protein hypothetical protein
TAIR PP10 AT2G07689.1 +3 1e-117 372 188/197 (95%) NADH-Ubiquinone/plastoquinone (complex I) protein | chr2:3336109-3336753 FORWARD LENGTH=214