MLOC_76213 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)2.646493.71273.111642.57917
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.002581770.006553290.0141244
CAR5Developing grain, bracts removed (5 DPA)0.0238044000.0208648
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_76213






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76213.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76213.1CUST_10185_PI427708083AvailableAvailablecontig_7056 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g38980.1 -3 2e-27 105 54/66 (82%) 13109.m03902 protein T-complex protein, putative, expressed
TAIR PP10 AT2G28000.1 -3 9e-11 56 25/47 (53%) | Symbols: CPN60A, CH-CPN60A, SLP | chaperonin-60alpha | chr2:11926603-11929184 FORWARD LENGTH=586