MLOC_76191 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6444320.6960730.6005110.677873
LEAShoots from the seedlings (10 cm shoot stage)0.2456340.09944780.05780390.120891
INF1Young developing inflorescences (5mm)1.441081.689681.2931.27189
INF2Developing inflorescences (1-1.5 cm)0.9994640.7110071.180090.991982
ROORoots from the seedlings (10 cm shoot stage)0.3549130.5394140.6775290.632579
NODDeveloping tillers at six leaf stage, 3rd internode0.08930580.132130.1323410.440638
CAR5Developing grain, bracts removed (5 DPA)0.9011380.8922240.9423780.872231
CAR15Developing grain, bracts removed (15 DPA)0.1924480.177780.1407920.424387



CDS Structure of MLOC_76191






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76191.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76191.1CUST_16265_PI427708080AvailableAvailablecontig_70474 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g05750.1 -3 0.0 1008 488/589 (83%) 13108.m00567 protein pentatricopeptide, putative, expressed
TAIR PP10 AT4G16835.1 -3 0.0 647 318/585 (54%) Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:9472763-9474803 FORWARD LENGTH=656