MLOC_76181 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains863.876721.697661.64779.599
LEAShoots from the seedlings (10 cm shoot stage)135.90226.299427.479852.2974
INF1Young developing inflorescences (5mm)774.195661.415991.526734.681
INF2Developing inflorescences (1-1.5 cm)573.298738.094850.378850.227
ROORoots from the seedlings (10 cm shoot stage)84.2231170.276196.492200.534
NODDeveloping tillers at six leaf stage, 3rd internode7.9893916.0198256.487199.574
CAR5Developing grain, bracts removed (5 DPA)14.878515.272815.647416.275
CAR15Developing grain, bracts removed (15 DPA)0.9257640.7392940.5788091.98969



CDS Structure of MLOC_76181






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76181.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358090NoneNoneNoneNone
MLOC_76181.1CUST_6557_PI427708080AvailableAvailablecontig_70438 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g41904.1 -2 4e-23 92 51/74 (69%) 13102.m04631 protein DEF7 - Defensin and Defensin-like DEFL family
TAIR PP10 AT2G02100.1 -2 5e-13 63 30/50 (60%) | Symbols: LCR69, PDF2.2 | low-molecular-weight cysteine-rich 69 | chr2:528397-528885 FORWARD LENGTH=77