MLOC_76174 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.05748240.051014100.0728748
LEAShoots from the seedlings (10 cm shoot stage)000.08131830.0793165
INF1Young developing inflorescences (5mm)0.0459880.196770.1190580.110045
INF2Developing inflorescences (1-1.5 cm)0.08005790.037673500.0818775
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.4218540.2477670.8646441.26136
CAR5Developing grain, bracts removed (5 DPA)00.08665770.05079420.0862191
CAR15Developing grain, bracts removed (15 DPA)0.1463510.10452900.417335



CDS Structure of MLOC_76174






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76174.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76174.1CUST_10174_PI427708083AvailableAvailablecontig_7041 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g26850.1 +3 2e-99 299 187/270 (69%) 13102.m02919 protein rRNA-processing protein FCF, putative, expressed
TAIR PP10 AT2G34570.1 +3 2e-42 150 84/220 (38%) | Symbols: MEE21 | PIN domain-like family protein | chr2:14563048-14564681 REVERSE LENGTH=281