MLOC_76173 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1672710.1735980.1125020.1595
LEAShoots from the seedlings (10 cm shoot stage)0.1335730.1083290.06394620.0860258
INF1Young developing inflorescences (5mm)0.1057730.05717910.02237670.0555277
INF2Developing inflorescences (1-1.5 cm)0.2833610.1503990.2295670.233457
ROORoots from the seedlings (10 cm shoot stage)0.1537950.4249160.1857290.41103
NODDeveloping tillers at six leaf stage, 3rd internode0.934841.274162.370164.44451
CAR5Developing grain, bracts removed (5 DPA)1.093971.184381.079171.05378
CAR15Developing grain, bracts removed (15 DPA)1.281031.626551.767023.36629



CDS Structure of MLOC_76173






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76173.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76173.1NoneAvailableAvailablecontig_70397 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48000.1 -2 8e-32 135 89/222 (40%) 13107.m05128 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10None-----