MLOC_76160 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.634518.760518.352321.4296
LEAShoots from the seedlings (10 cm shoot stage)14.87211.83524.08045.50851
INF1Young developing inflorescences (5mm)91.2614129.652109.899106.044
INF2Developing inflorescences (1-1.5 cm)72.5507140.11992.7206140.145
ROORoots from the seedlings (10 cm shoot stage)15.993512.955718.661715.796
NODDeveloping tillers at six leaf stage, 3rd internode0.134730.4117680.1301380.894392
CAR5Developing grain, bracts removed (5 DPA)16.575916.961114.503817.1892
CAR15Developing grain, bracts removed (15 DPA)1.748670.5385722.346533.76277



CDS Structure of MLOC_76160






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76160.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367091NoneNoneNoneNone
MLOC_76160.3CUST_18462_PI427708080AvailableAvailablecontig_105670 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g53950.2 -1 4e-162 466 245/299 (82%) 13104.m05570 protein glycosyl hydrolases family 16 protein, protein, expressed
TAIR PP10 AT4G03210.1 -1 6e-83 261 136/291 (47%) | Symbols: XTH9 | xyloglucan endotransglucosylase/hydrolase 9 | chr4:1416019-1417197 FORWARD LENGTH=290