MLOC_76145 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.062944.92164.652164.12725
LEAShoots from the seedlings (10 cm shoot stage)5.442414.578934.674123.62628
INF1Young developing inflorescences (5mm)8.33898.2806510.07076.73796
INF2Developing inflorescences (1-1.5 cm)14.691911.822314.813513.2183
ROORoots from the seedlings (10 cm shoot stage)2.010643.57783.553883.24096
NODDeveloping tillers at six leaf stage, 3rd internode4.828553.981075.6806111.1924
CAR5Developing grain, bracts removed (5 DPA)7.768596.916118.226476.429
CAR15Developing grain, bracts removed (15 DPA)4.057843.793324.448418.50498



CDS Structure of MLOC_76145






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76145.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76145.4NoneAvailableAvailablecontig_70291 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g45480.2 +1 3e-14 76 40/50 (80%) 13106.m04794 protein hydrolase, putative, expressed
TAIR PP10 AT5G14850.2 +1 6e-11 66 29/51 (57%) Alg9-like mannosyltransferase family | chr5:4802155-4804977 REVERSE LENGTH=529