MLOC_76142 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.2069214.890614.253410.1277
LEAShoots from the seedlings (10 cm shoot stage)14.605211.12611.2368.84418
INF1Young developing inflorescences (5mm)17.811317.964318.345211.8905
INF2Developing inflorescences (1-1.5 cm)18.381518.046217.456216.2709
ROORoots from the seedlings (10 cm shoot stage)10.685412.57749.4982711.4187
NODDeveloping tillers at six leaf stage, 3rd internode13.984513.120820.18438.2816
CAR5Developing grain, bracts removed (5 DPA)15.802913.737216.855711.7483
CAR15Developing grain, bracts removed (15 DPA)10.49699.191469.22118.0634



CDS Structure of MLOC_76142






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76142.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76142.1CUST_13250_PI427708083AvailableAvailablecontig_7027 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g32600.1 -2 4e-141 418 205/217 (94%) 13105.m03360 protein cyclin-dependent kinase D-1, putative, expressed
TAIR PP10 AT1G73690.1 -2 3e-119 360 176/206 (85%) | Symbols: CDKD1;1, AT;CDKD;1, CAK3AT | cyclin-dependent kinase D1;1 | chr1:27715113-27717018 FORWARD LENGTH=398