MLOC_76113 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.07369.298959.806518.81035
LEAShoots from the seedlings (10 cm shoot stage)12.23615.284419.792510.955
INF1Young developing inflorescences (5mm)7.699647.003035.533844.58876
INF2Developing inflorescences (1-1.5 cm)5.463267.423516.994115.70153
ROORoots from the seedlings (10 cm shoot stage)17.867518.638321.508318.076
NODDeveloping tillers at six leaf stage, 3rd internode15.076917.671520.584449.7985
CAR5Developing grain, bracts removed (5 DPA)8.566639.80467.908676.49263
CAR15Developing grain, bracts removed (15 DPA)5.511335.377456.015039.71132



CDS Structure of MLOC_76113






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76113.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76113.1CUST_13249_PI427708083AvailableAvailablecontig_7017 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g55360.3 -3 9e-61 207 97/110 (88%) 13101.m05831 protein phosphatidate cytidylyltransferase, putative, expressed
TAIR PP10 AT1G62430.1 -3 2e-54 189 94/121 (78%) | Symbols: ATCDS1, CDS1 | CDP-diacylglycerol synthase 1 | chr1:23106274-23108923 REVERSE LENGTH=421