MLOC_7610 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 240.597 | 145.167 | 154.622 | 125.09 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 89.8661 | 48.5112 | 69.0915 | 42.9807 |
| INF1 | Young developing inflorescences (5mm) | 267.839 | 217.784 | 249.076 | 150.868 |
| INF2 | Developing inflorescences (1-1.5 cm) | 208.712 | 167.101 | 240.672 | 161.064 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 172.631 | 158.196 | 200.195 | 120.896 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.0385 | 7.02285 | 40.6602 | 26.0125 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 174.02 | 179.991 | 181.585 | 119.486 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 57.6681 | 56.7185 | 48.9031 | 97.335 |
CDS Structure of MLOC_7610
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7610.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g03090.1 |
+1 |
2e-88 |
279 |
137/145 (94%) |
13112.m00263 protein ribosomal protein, putative, expressed |
| TAIR PP10 |
AT2G09990.1 |
+1 |
1e-68 |
225 |
107/144 (74%) |
Ribosomal protein S5 domain 2-like superfamily protein | chr2:3781442-3781882 FORWARD LENGTH=146 |
