MLOC_7605 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1851990.05460500.113366
LEAShoots from the seedlings (10 cm shoot stage)0.08272020.09765930.3857430.163493
INF1Young developing inflorescences (5mm)0.1212780.14120900.131705
INF2Developing inflorescences (1-1.5 cm)0.04429380.042572500.0646868
ROORoots from the seedlings (10 cm shoot stage)0.56495700.1370480.150031
NODDeveloping tillers at six leaf stage, 3rd internode00.018796700.150327
CAR5Developing grain, bracts removed (5 DPA)25.304432.831124.81730.5323
CAR15Developing grain, bracts removed (15 DPA)3.627353.901093.7762510.3502



CDS Structure of MLOC_7605






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7605.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7605.1CUST_16257_PI427708080AvailableAvailablecontig_139645 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g38610.1 -2 2e-18 82 37/39 (95%) 13109.m03849 protein ZOS9-18 - C2H2 zinc finger protein, expressed
TAIR PP10 AT5G57520.1 -2 6e-16 74 32/36 (89%) | Symbols: ZFP2, ATZFP2 | zinc finger protein 2 | chr5:23296019-23296471 FORWARD LENGTH=150