MLOC_76040 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.700661.822282.083991.55407
LEAShoots from the seedlings (10 cm shoot stage)3.326152.561972.997132.11695
INF1Young developing inflorescences (5mm)2.127952.716294.148062.07265
INF2Developing inflorescences (1-1.5 cm)5.166714.749315.527384.78954
ROORoots from the seedlings (10 cm shoot stage)1.999172.613552.45342.32565
NODDeveloping tillers at six leaf stage, 3rd internode2.155532.459944.401336.95752
CAR5Developing grain, bracts removed (5 DPA)3.220513.272283.525472.73558
CAR15Developing grain, bracts removed (15 DPA)1.603121.45562.170963.50869



CDS Structure of MLOC_76040






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76040.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76040.1CUST_10158_PI427708083AvailableAvailablecontig_69931 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g72205.1 -3 1e-11 67 32/64 (50%) 13101.m07865 protein proline synthetase co-transcribed bacterial homolog protein, putative, expressed
TAIR PP10None-----