MLOC_76018 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains444.061403.001353.128412.173
LEAShoots from the seedlings (10 cm shoot stage)0.3884250.12628500.231476
INF1Young developing inflorescences (5mm)0.3448360.3209640.1814570.264098
INF2Developing inflorescences (1-1.5 cm)0.08617350.081887700.122172
ROORoots from the seedlings (10 cm shoot stage)229.976252.109118.606281.498
NODDeveloping tillers at six leaf stage, 3rd internode0.049710700.02899290.0297021
CAR5Developing grain, bracts removed (5 DPA)00.06505320.0351730.0582264
CAR15Developing grain, bracts removed (15 DPA)0.1149240.1282560.1248180.317241



CDS Structure of MLOC_76018






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76018.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250837.1NoneNoneNoneNone
MLOC_76018.2CUST_6552_PI427708080AvailableAvailablecontig_69833 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g06100.1 +1 5e-161 465 234/359 (65%) 13108.m00605 protein O-methyltransferase, putative, expressed
TAIR PP10 AT5G54160.1 +1 1e-127 379 179/337 (53%) | Symbols: ATOMT1, OMT1 | O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363