MLOC_76014 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.399482.710462.142781.73849
LEAShoots from the seedlings (10 cm shoot stage)3.661814.053423.636522.61044
INF1Young developing inflorescences (5mm)3.730554.440365.264982.88272
INF2Developing inflorescences (1-1.5 cm)7.608626.248116.616195.97205
ROORoots from the seedlings (10 cm shoot stage)0.4560371.038181.493041.00072
NODDeveloping tillers at six leaf stage, 3rd internode1.232552.044452.389875.76759
CAR5Developing grain, bracts removed (5 DPA)5.146164.436514.661583.57414
CAR15Developing grain, bracts removed (15 DPA)5.340534.312675.297328.86505



CDS Structure of MLOC_76014






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76014.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76014.1CUST_13245_PI427708083AvailableAvailablecontig_69817 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g46090.1 +2 5e-38 147 72/75 (96%) 13102.m05170 protein CAMK_CAMK_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT2G17290.1 +2 6e-33 131 60/75 (80%) | Symbols: CPK6, ATCDPK3, ATCPK6 | Calcium-dependent protein kinase family protein | chr2:7517005-7519239 FORWARD LENGTH=544