MLOC_76003 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.05470230.03373950.0456660.0500698
LEAShoots from the seedlings (10 cm shoot stage)0.02667860.09234110.05771570.0733001
INF1Young developing inflorescences (5mm)0.01350510.04687440.1752450.0940142
INF2Developing inflorescences (1-1.5 cm)0.02891100.01771960.0381148
ROORoots from the seedlings (10 cm shoot stage)00.1527410.04680150.315732
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.2656870.4082060.3955040.475349
CAR15Developing grain, bracts removed (15 DPA)0.07881810.07503430.13360.264152



CDS Structure of MLOC_76003






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76003.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376686NoneNoneNoneNone
MLOC_76003.1CUST_6551_PI427708080AvailableAvailablecontig_69788 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g41270.1 +1 0.0 902 448/484 (93%) 13105.m04379 protein CAMK_CAMK_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT5G19360.1 +1 0.0 802 390/482 (81%) | Symbols: CPK34 | calcium-dependent protein kinase 34 | chr5:6521716-6523780 REVERSE LENGTH=523