- Predicted Gene MLOC_76003
MLOC_76003 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0547023 | 0.0337395 | 0.045666 | 0.0500698 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0266786 | 0.0923411 | 0.0577157 | 0.0733001 |
INF1 | Young developing inflorescences (5mm) | 0.0135051 | 0.0468744 | 0.175245 | 0.0940142 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.028911 | 0 | 0.0177196 | 0.0381148 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.152741 | 0.0468015 | 0.315732 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.265687 | 0.408206 | 0.395504 | 0.475349 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0788181 | 0.0750343 | 0.1336 | 0.264152 |
CDS Structure of MLOC_76003
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_76003.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g41270.1 |
+1 |
0.0 |
902 |
448/484 (93%) |
13105.m04379 protein CAMK_CAMK_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
TAIR PP10 |
AT5G19360.1 |
+1 |
0.0 |
802 |
390/482 (81%) |
| Symbols: CPK34 | calcium-dependent protein kinase 34 | chr5:6521716-6523780 REVERSE LENGTH=523 |