- Predicted Gene MLOC_76000
MLOC_76000 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_76000_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_76000_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 832.79 | 994.485 | 992.765 | 964.994 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 461.144 | 183.636 | 185.046 | 241.841 |
INF1 | Young developing inflorescences (5mm) | 284.622 | 267.881 | 228.172 | 224.996 |
INF2 | Developing inflorescences (1-1.5 cm) | 124.237 | 127.263 | 128.909 | 139.417 |
ROO | Roots from the seedlings (10 cm shoot stage) | 728.058 | 688.127 | 469.062 | 803.273 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1482.64 | 1361.28 | 1013.74 | 4131.3 |
CAR5 | Developing grain, bracts removed (5 DPA) | 296.518 | 290.991 | 309.219 | 292.909 |
CAR15 | Developing grain, bracts removed (15 DPA) | 58.5604 | 55.9045 | 62.7387 | 131.254 |
CDS Structure of MLOC_76000
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_76000.8
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g42876.1 |
+2 |
0.0 |
1354 |
720/798 (90%) |
13112.m22136 protein 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed |
TAIR PP10 |
AT5G17920.2 |
+2 |
0.0 |
1278 |
669/797 (84%) |
| Symbols: ATCIMS | Cobalamin-independent synthase family protein | chr5:5935771-5939195 FORWARD LENGTH=765 |