MLOC_76000 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains832.79994.485992.765964.994
LEAShoots from the seedlings (10 cm shoot stage)461.144183.636185.046241.841
INF1Young developing inflorescences (5mm)284.622267.881228.172224.996
INF2Developing inflorescences (1-1.5 cm)124.237127.263128.909139.417
ROORoots from the seedlings (10 cm shoot stage)728.058688.127469.062803.273
NODDeveloping tillers at six leaf stage, 3rd internode1482.641361.281013.744131.3
CAR5Developing grain, bracts removed (5 DPA)296.518290.991309.219292.909
CAR15Developing grain, bracts removed (15 DPA)58.560455.904562.7387131.254



CDS Structure of MLOC_76000






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76000.8
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252533.1NoneNoneNoneNone
MLOC_76000.8CUST_6550_PI427708080AvailableAvailablecontig_6978 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g42876.1 +2 0.0 1354 720/798 (90%) 13112.m22136 protein 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed
TAIR PP10 AT5G17920.2 +2 0.0 1278 669/797 (84%) | Symbols: ATCIMS | Cobalamin-independent synthase family protein | chr5:5935771-5939195 FORWARD LENGTH=765