MLOC_760 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.66410.7454131.16711.07612
LEAShoots from the seedlings (10 cm shoot stage)1.689992.98763.473672.19445
INF1Young developing inflorescences (5mm)0.03995680.0724150.02511020.0454381
INF2Developing inflorescences (1-1.5 cm)0.08752970.021050700.0735763
ROORoots from the seedlings (10 cm shoot stage)4.654412.466972.292482.95808
NODDeveloping tillers at six leaf stage, 3rd internode0.8543520.8614961.897722.9407
CAR5Developing grain, bracts removed (5 DPA)0.1904580.2078270.2254430.227648
CAR15Developing grain, bracts removed (15 DPA)0.01697270.02033050.02435310.0565553



CDS Structure of MLOC_760






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_760.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365261NoneNoneNoneNone
MLOC_760.1CUST_13536_PI427708083AvailableAvailablecontig_105670 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g30100.1 -3 2e-78 192 125/222 (56%) 13108.m03115 protein 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed
TAIR PP10 AT1G06620.1 -3 6e-58 130 96/227 (42%) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2025618-2027094 FORWARD LENGTH=365