MLOC_75997 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.9197310.291610.20499.79841
LEAShoots from the seedlings (10 cm shoot stage)7.375233.51533.659353.87572
INF1Young developing inflorescences (5mm)32.891834.049535.699628.3489
INF2Developing inflorescences (1-1.5 cm)49.508736.131646.986646.9252
ROORoots from the seedlings (10 cm shoot stage)8.588038.2331510.43149.31611
NODDeveloping tillers at six leaf stage, 3rd internode2.17632.747324.937039.12138
CAR5Developing grain, bracts removed (5 DPA)13.367113.9515.090813.6351
CAR15Developing grain, bracts removed (15 DPA)7.848285.943227.8753416.6358



CDS Structure of MLOC_75997






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75997.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372928NoneNoneNoneNone
MLOC_75997.1CUST_6549_PI427708080AvailableAvailablecontig_69761 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g17610.1 +2 0.0 684 397/446 (89%) 13103.m02106 protein OsTOP6A3 - Topoisomerase 6 subunit A homolog 3, expressed
TAIR PP10 AT5G02820.1 +2 0.0 551 275/363 (76%) | Symbols: RHL2, BIN5 | Spo11/DNA topoisomerase VI, subunit A protein | chr5:642658-644123 FORWARD LENGTH=427