- Predicted Gene MLOC_75972
MLOC_75972 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 31.333 | 27.9342 | 26.2941 | 30.3585 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 118.603 | 115.643 | 184.923 | 116.534 |
| INF1 | Young developing inflorescences (5mm) | 16.5625 | 16.2394 | 22.0009 | 17.4916 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.26684 | 12.3841 | 13.4703 | 14.8369 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.1992 | 5.78396 | 8.80512 | 7.42375 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 218.712 | 372.708 | 473.158 | 1067.94 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 26.3631 | 34.3085 | 26.1106 | 34.137 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.37492 | 3.76156 | 3.33769 | 10.015 |
CDS Structure of MLOC_75972
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75972.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g19380.1 |
-3 |
5e-49 |
162 |
83/106 (78%) |
13103.m02318 protein calvin cycle protein CP12, putative, expressed |
| TAIR PP10 |
AT2G47400.1 |
-3 |
7e-34 |
121 |
59/87 (68%) |
| Symbols: CP12-1, CP12 | CP12 domain-containing protein 1 | chr2:19446889-19447263 FORWARD LENGTH=124 |
