MLOC_75966 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.94784.788185.708945.40579
LEAShoots from the seedlings (10 cm shoot stage)5.717224.010235.499854.08028
INF1Young developing inflorescences (5mm)13.070413.859213.382811.1466
INF2Developing inflorescences (1-1.5 cm)6.551757.554147.185697.78658
ROORoots from the seedlings (10 cm shoot stage)7.581254.732773.083855.5918
NODDeveloping tillers at six leaf stage, 3rd internode2.350983.018397.792111.1076
CAR5Developing grain, bracts removed (5 DPA)7.025845.130354.581065.42563
CAR15Developing grain, bracts removed (15 DPA)0.7597070.549020.6113541.53887



CDS Structure of MLOC_75966






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75966.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75966.2CUST_16248_PI427708080AvailableAvailablecontig_6964 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g04110.1 +2 1e-127 246 118/154 (77%) 13102.m00412 protein expressed protein
TAIR PP10 AT2G18245.1 +3 9e-68 139 67/120 (56%) alpha/beta-Hydrolases superfamily protein | chr2:7937353-7939382 FORWARD LENGTH=398