MLOC_75959 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.927932.132762.993494.49982
LEAShoots from the seedlings (10 cm shoot stage)5.567391.40753.65924.17898
INF1Young developing inflorescences (5mm)3.934014.312995.554366.62962
INF2Developing inflorescences (1-1.5 cm)6.027435.4097313.874612.9256
ROORoots from the seedlings (10 cm shoot stage)3.317853.532476.785127.77312
NODDeveloping tillers at six leaf stage, 3rd internode9.637418.3491213.042345.2314
CAR5Developing grain, bracts removed (5 DPA)6.475875.797789.2215310.3033
CAR15Developing grain, bracts removed (15 DPA)2.383332.859423.3264711.3116



CDS Structure of MLOC_75959






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75959.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75959.1CUST_10147_PI427708083AvailableAvailablecontig_696185 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g05280.1 -3 7e-36 127 59/71 (83%) 13105.m00547 protein zinc finger family protein, putative, expressed
TAIR PP10 AT3G47990.1 -3 2e-30 111 48/61 (79%) | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:17713367-17716051 REVERSE LENGTH=358