- Predicted Gene MLOC_75930
MLOC_75930 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.58273 | 3.26491 | 5.1158 | 2.61413 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.2048 | 3.22574 | 5.25355 | 2.35195 |
| INF1 | Young developing inflorescences (5mm) | 4.01892 | 5.06745 | 5.87508 | 2.74146 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.41989 | 5.75528 | 4.68953 | 4.8179 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.60349 | 3.32883 | 3.6415 | 3.21814 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.7434 | 4.67595 | 6.81284 | 11.4063 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.30214 | 3.24657 | 3.15359 | 2.26186 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.84912 | 2.08798 | 1.09062 | 2.96917 |
CDS Structure of MLOC_75930
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75930.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g47650.1 |
-2 |
2e-22 |
97 |
49/75 (65%) |
13101.m04927 protein vacuolar protein sorting-associated protein 16, putative, expressed |
| TAIR PP10 |
AT2G38020.2 |
-2 |
3e-14 |
71 |
38/74 (51%) |
| Symbols: VCL1, MAN, EMB258 | vacuoleless1 (VCL1) | chr2:15910272-15914190 REVERSE LENGTH=834 |