MLOC_75899 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.66236.763236.395077.23647
LEAShoots from the seedlings (10 cm shoot stage)8.456727.287936.40486.63327
INF1Young developing inflorescences (5mm)13.30518.066919.809215.2976
INF2Developing inflorescences (1-1.5 cm)50.253626.024837.702642.1021
ROORoots from the seedlings (10 cm shoot stage)14.507213.424913.448317.7373
NODDeveloping tillers at six leaf stage, 3rd internode9.2810711.704415.141243.4093
CAR5Developing grain, bracts removed (5 DPA)13.929715.506714.656415.3608
CAR15Developing grain, bracts removed (15 DPA)45.693941.318751.2689109.22



CDS Structure of MLOC_75899






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75899.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248567.1NoneNoneNoneNone
MLOC_75899.2CUST_6544_PI427708080AvailableAvailablecontig_69336 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g04010.1 +3 1e-148 442 244/340 (72%) 13104.m00324 protein expressed protein
TAIR PP10 AT3G24740.2 +3 6e-92 294 163/342 (48%) Protein of unknown function (DUF1644) | chr3:9032397-9033461 FORWARD LENGTH=354