- Predicted Gene MLOC_75899
MLOC_75899 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.6623 | 6.76323 | 6.39507 | 7.23647 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.45672 | 7.28793 | 6.4048 | 6.63327 |
INF1 | Young developing inflorescences (5mm) | 13.305 | 18.0669 | 19.8092 | 15.2976 |
INF2 | Developing inflorescences (1-1.5 cm) | 50.2536 | 26.0248 | 37.7026 | 42.1021 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.5072 | 13.4249 | 13.4483 | 17.7373 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.28107 | 11.7044 | 15.1412 | 43.4093 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.9297 | 15.5067 | 14.6564 | 15.3608 |
CAR15 | Developing grain, bracts removed (15 DPA) | 45.6939 | 41.3187 | 51.2689 | 109.22 |
CDS Structure of MLOC_75899
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75899.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g04010.1 |
+3 |
1e-148 |
442 |
244/340 (72%) |
13104.m00324 protein expressed protein |
TAIR PP10 |
AT3G24740.2 |
+3 |
6e-92 |
294 |
163/342 (48%) |
Protein of unknown function (DUF1644) | chr3:9032397-9033461 FORWARD LENGTH=354 |