- Predicted Gene MLOC_75885
MLOC_75885 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.10302 | 1.6092 | 1.22259 | 1.02527 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.96307 | 1.20636 | 1.9096 | 1.19266 |
| INF1 | Young developing inflorescences (5mm) | 1.79023 | 2.78798 | 2.43337 | 1.3772 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.84713 | 2.82988 | 2.3219 | 2.29511 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.935467 | 1.27686 | 2.49325 | 1.18635 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.851442 | 1.1968 | 1.55594 | 3.38914 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.36123 | 1.84539 | 2.28978 | 1.55274 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.878775 | 0.726547 | 0.642759 | 1.36385 |
CDS Structure of MLOC_75885
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75885.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g07120.1 |
+2 |
4e-26 |
115 |
57/70 (81%) |
13102.m00801 protein HEAT repeat family protein, putative, expressed |
| TAIR PP10 |
AT2G02560.2 |
+2 |
3e-18 |
89 |
48/71 (68%) |
| Symbols: CAND1, ATCAND1, ETA2, TIP120, HVE | cullin-associated and neddylation dissociated | chr2:690345-697342 FORWARD LENGTH=1217 |