MLOC_7586 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.1662 | 6.54355 | 6.41191 | 6.62338 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.2924 | 6.20692 | 5.04328 | 7.66044 |
| INF1 | Young developing inflorescences (5mm) | 7.03067 | 10.3327 | 9.71759 | 8.57886 |
| INF2 | Developing inflorescences (1-1.5 cm) | 15.1006 | 11.6296 | 13.1752 | 15.9347 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 31.4652 | 33.1574 | 19.3446 | 39.1002 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 23.6662 | 29.8609 | 16.091 | 85.045 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.3171 | 17.4956 | 18.3405 | 18.6681 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.8469 | 2.92429 | 3.4845 | 8.13022 |
CDS Structure of MLOC_7586
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7586.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g46040.1 |
-1 |
2e-166 |
486 |
258/368 (70%) |
13105.m04901 protein protein phosphatase 2C, putative, expressed |
| TAIR PP10 |
AT1G72770.3 |
-1 |
6e-109 |
341 |
181/342 (53%) |
| Symbols: HAB1 | homology to ABI1 | chr1:27390998-27392851 FORWARD LENGTH=511 |
