MLOC_75827 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.131846.87137.293817.9341
LEAShoots from the seedlings (10 cm shoot stage)9.941293.029365.563945.40473
INF1Young developing inflorescences (5mm)21.103418.273121.773619.5364
INF2Developing inflorescences (1-1.5 cm)18.934724.266825.402328.3937
ROORoots from the seedlings (10 cm shoot stage)0.5739873.520024.332934.39677
NODDeveloping tillers at six leaf stage, 3rd internode1.74551.852933.11656.90326
CAR5Developing grain, bracts removed (5 DPA)18.729619.176918.337120.968
CAR15Developing grain, bracts removed (15 DPA)1.361461.014741.543293.35668



CDS Structure of MLOC_75827






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75827.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357716NoneNoneNoneNone
MLOC_75827.1CUST_6539_PI427708080AvailableAvailablecontig_69083 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g01790.1 +3 0.0 619 328/424 (77%) 13111.m00094 protein protein phosphatase 2c, putative, expressed
TAIR PP10 AT3G02750.2 +3 1e-109 342 195/424 (46%) Protein phosphatase 2C family protein | chr3:593601-595457 REVERSE LENGTH=492