MLOC_75724 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains191.91181.349172.739181.655
LEAShoots from the seedlings (10 cm shoot stage)71.461745.942937.325642.2578
INF1Young developing inflorescences (5mm)180.359170.894184.74152.727
INF2Developing inflorescences (1-1.5 cm)221.931159.186171.132200.058
ROORoots from the seedlings (10 cm shoot stage)175.667129.958146.751158.914
NODDeveloping tillers at six leaf stage, 3rd internode240.132209.041228.182619.085
CAR5Developing grain, bracts removed (5 DPA)94.8761103.457108.662100.366
CAR15Developing grain, bracts removed (15 DPA)17.133316.410716.102240.5729



CDS Structure of MLOC_75724






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75724.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250574.1NoneNoneNoneNone
MLOC_75724.1CUST_6537_PI427708080AvailableAvailablecontig_6873 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g15940.1 +1 9e-111 332 163/183 (89%) 13103.m01883 protein OsWLIM2 - LIM domain protein, putative actin-binding protein and transcription factor, expressed
TAIR PP10 AT2G39900.1 +1 8e-94 287 137/182 (75%) GATA type zinc finger transcription factor family protein | chr2:16659136-16660267 FORWARD LENGTH=200