- Predicted Gene MLOC_75724
MLOC_75724 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_75724_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_75724_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 191.91 | 181.349 | 172.739 | 181.655 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 71.4617 | 45.9429 | 37.3256 | 42.2578 |
INF1 | Young developing inflorescences (5mm) | 180.359 | 170.894 | 184.74 | 152.727 |
INF2 | Developing inflorescences (1-1.5 cm) | 221.931 | 159.186 | 171.132 | 200.058 |
ROO | Roots from the seedlings (10 cm shoot stage) | 175.667 | 129.958 | 146.751 | 158.914 |
NOD | Developing tillers at six leaf stage, 3rd internode | 240.132 | 209.041 | 228.182 | 619.085 |
CAR5 | Developing grain, bracts removed (5 DPA) | 94.8761 | 103.457 | 108.662 | 100.366 |
CAR15 | Developing grain, bracts removed (15 DPA) | 17.1333 | 16.4107 | 16.1022 | 40.5729 |
CDS Structure of MLOC_75724
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75724.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g15940.1 |
+1 |
9e-111 |
332 |
163/183 (89%) |
13103.m01883 protein OsWLIM2 - LIM domain protein, putative actin-binding protein and transcription factor, expressed |
TAIR PP10 |
AT2G39900.1 |
+1 |
8e-94 |
287 |
137/182 (75%) |
GATA type zinc finger transcription factor family protein | chr2:16659136-16660267 FORWARD LENGTH=200 |