MLOC_75709 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.762840.941636.639331.5757
LEAShoots from the seedlings (10 cm shoot stage)60.274845.609135.067239.9714
INF1Young developing inflorescences (5mm)93.84590.145685.098269.8062
INF2Developing inflorescences (1-1.5 cm)102.935113.23898.4003107.649
ROORoots from the seedlings (10 cm shoot stage)29.808258.334840.229161.6103
NODDeveloping tillers at six leaf stage, 3rd internode51.642468.438678.5523228.404
CAR5Developing grain, bracts removed (5 DPA)90.608679.786791.149277.7832
CAR15Developing grain, bracts removed (15 DPA)41.646542.709942.4285.2166



CDS Structure of MLOC_75709






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75709.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75709.2CUST_16207_PI427708080AvailableAvailablecontig_6865 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g51270.1 +2 0.0 2209 1130/1356 (83%) 13106.m05531 protein 1,3-beta-glucan synthase component domain containing protein, expressed
TAIR PP10 AT5G13000.1 +2 0.0 2071 1060/1428 (74%) | Symbols: ATGSL12, gsl12 | glucan synthase-like 12 | chr5:4110445-4121202 REVERSE LENGTH=1955