MLOC_75658 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.260526.707525.609528.78
LEAShoots from the seedlings (10 cm shoot stage)33.936712.393319.793720.7188
INF1Young developing inflorescences (5mm)24.812728.029126.460423.7185
INF2Developing inflorescences (1-1.5 cm)26.456929.593726.828832.8476
ROORoots from the seedlings (10 cm shoot stage)11.874117.198915.479422.2394
NODDeveloping tillers at six leaf stage, 3rd internode16.535514.982913.177153.1327
CAR5Developing grain, bracts removed (5 DPA)16.343717.309916.079717.8125
CAR15Developing grain, bracts removed (15 DPA)3.23982.709682.876687.21693



CDS Structure of MLOC_75658






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75658.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359406NoneNoneNoneNone
MLOC_75658.2CUST_6534_PI427708080AvailableAvailablecontig_6854 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g50760.2 +2 0.0 656 393/446 (88%) 13102.m05760 protein heat shock protein DnaJ, putative, expressed
TAIR PP10 AT1G24120.1 +2 4e-171 496 266/420 (63%) | Symbols: ARL1 | ARG1-like 1 | chr1:8529283-8531946 REVERSE LENGTH=436