MLOC_75627 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.32217.919727.982197.851
LEAShoots from the seedlings (10 cm shoot stage)9.701168.1046514.45828.46919
INF1Young developing inflorescences (5mm)5.541846.358367.199974.71952
INF2Developing inflorescences (1-1.5 cm)2.899593.703293.574343.42104
ROORoots from the seedlings (10 cm shoot stage)11.29710.476110.099811.8124
NODDeveloping tillers at six leaf stage, 3rd internode26.116331.594924.5648104.587
CAR5Developing grain, bracts removed (5 DPA)3.58693.625875.014393.36617
CAR15Developing grain, bracts removed (15 DPA)0.4861230.6393371.500581.46805



CDS Structure of MLOC_75627






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75627.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75627.3CUST_16198_PI427708080AvailableAvailablecontig_68411 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g46340.1 -3 5e-93 290 139/171 (81%) 13107.m04882 protein methyltransferase, putative, expressed
TAIR PP10 AT3G60910.1 -3 1e-67 221 104/173 (60%) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:22501727-22503182 FORWARD LENGTH=252