MLOC_75626 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains38.188935.871339.058536.4391
LEAShoots from the seedlings (10 cm shoot stage)19.654838.88938.534425.4536
INF1Young developing inflorescences (5mm)0.61190.7911471.056910.610372
INF2Developing inflorescences (1-1.5 cm)0.7725790.5705080.7774880.666657
ROORoots from the seedlings (10 cm shoot stage)13.448312.564217.245814.8695
NODDeveloping tillers at six leaf stage, 3rd internode11.775610.47095.5180627.8601
CAR5Developing grain, bracts removed (5 DPA)0.6194590.4490170.5306020.465981
CAR15Developing grain, bracts removed (15 DPA)3.890333.954453.225678.72932



CDS Structure of MLOC_75626






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75626.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362901NoneNoneNoneNone
MLOC_75626.1CUST_6530_PI427708080AvailableAvailablecontig_68411 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g46350.1 +2 0.0 738 372/491 (76%) 13107.m04885 protein OsSCP40 - Putative Serine Carboxypeptidase homologue, expressed
TAIR PP10 AT3G63470.1 +2 2e-162 507 248/430 (58%) | Symbols: scpl40 | serine carboxypeptidase-like 40 | chr3:23438561-23440862 FORWARD LENGTH=502