MLOC_75615 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains31.653823.16524.64825.8731
LEAShoots from the seedlings (10 cm shoot stage)10.64761.805315.44934.68101
INF1Young developing inflorescences (5mm)11.80749.4138211.37649.83883
INF2Developing inflorescences (1-1.5 cm)8.7400813.240112.374313.6291
ROORoots from the seedlings (10 cm shoot stage)20.477214.69617.487917.1563
NODDeveloping tillers at six leaf stage, 3rd internode1.374251.768780.6424443.64863
CAR5Developing grain, bracts removed (5 DPA)12.471112.466511.589612.7942
CAR15Developing grain, bracts removed (15 DPA)0.6034270.6192930.813321.7435



CDS Structure of MLOC_75615






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75615.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75615.1CUST_16197_PI427708080AvailableAvailablecontig_68349 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g04340.1 +2 0.0 630 315/359 (88%) 13103.m00442 protein C-methyltransferase, putative, expressed
TAIR PP10 AT1G20330.1 +2 2e-174 501 249/365 (68%) | Symbols: SMT2, CVP1, FRL1 | sterol methyltransferase 2 | chr1:7038968-7040053 REVERSE LENGTH=361