MLOC_75604 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.065680.5273720.5510970.631048
LEAShoots from the seedlings (10 cm shoot stage)0.19363500.1702460.147067
INF1Young developing inflorescences (5mm)0.2501070.1505370.19040.179568
INF2Developing inflorescences (1-1.5 cm)0.2067750.2955430.07842280.255566
ROORoots from the seedlings (10 cm shoot stage)1.435920.8880971.286421.04567
NODDeveloping tillers at six leaf stage, 3rd internode0.050629200.01030990.0142468
CAR5Developing grain, bracts removed (5 DPA)132.02125.14196.7872121.337
CAR15Developing grain, bracts removed (15 DPA)00.03158270.03709330.18617



CDS Structure of MLOC_75604






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75604.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375210NoneNoneNoneNone
MLOC_75604.1CUST_6528_PI427708080AvailableAvailablecontig_68319 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g38150.1 -3 1e-90 277 149/203 (73%) 13112.m03928 protein osmotin, putative, expressed
TAIR PP10 AT2G28790.1 -3 2e-25 103 78/225 (35%) Pathogenesis-related thaumatin superfamily protein | chr2:12354664-12355413 REVERSE LENGTH=249