MLOC_75601 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.057452.866961.898812.73379
LEAShoots from the seedlings (10 cm shoot stage)1.576650.592120.5245310.700499
INF1Young developing inflorescences (5mm)0.5340740.5957140.7899450.564033
INF2Developing inflorescences (1-1.5 cm)0.2154240.1297360.09369630.181587
ROORoots from the seedlings (10 cm shoot stage)1.270961.338891.377841.39126
NODDeveloping tillers at six leaf stage, 3rd internode4.8795.285112.726818.2679
CAR5Developing grain, bracts removed (5 DPA)0.09913250.06310330.03090210.0664943
CAR15Developing grain, bracts removed (15 DPA)0.0223993000.0767502



CDS Structure of MLOC_75601






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75601.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75601.1CUST_17843_PI427708080AvailableAvailablecontig_68314 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g43940.1 +2 8e-46 164 165/276 (60%) 13102.m04889 protein AP2 domain containing protein, expressed
TAIR PP10 AT5G11590.1 +2 2e-27 110 64/83 (77%) | Symbols: TINY2 | Integrase-type DNA-binding superfamily protein | chr5:3727789-3728499 REVERSE LENGTH=236