MLOC_75585 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.087074.722864.463454.59117
LEAShoots from the seedlings (10 cm shoot stage)4.737150.2092220.9472141.74518
INF1Young developing inflorescences (5mm)8.783167.543188.717727.45071
INF2Developing inflorescences (1-1.5 cm)5.965018.5338.674068.81845
ROORoots from the seedlings (10 cm shoot stage)0.633352.561451.292492.6828
NODDeveloping tillers at six leaf stage, 3rd internode00.025912900.212305
CAR5Developing grain, bracts removed (5 DPA)2.897342.125542.302532.43507
CAR15Developing grain, bracts removed (15 DPA)0.7730190.1665810.8973351.39201



CDS Structure of MLOC_75585






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75585.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357779NoneNoneNoneNone
MLOC_75585.1CUST_6525_PI427708080AvailableAvailablecontig_68278 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g53800.5 -3 0.0 837 414/482 (86%) 13103.m05883 protein periplasmic beta-glucosidase precursor, putative, expressed
TAIR PP10 AT5G20950.2 -3 0.0 733 352/484 (73%) Glycosyl hydrolase family protein | chr5:7107609-7110775 REVERSE LENGTH=624