MLOC_75563 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.51209700.07884110.293785
INF1Young developing inflorescences (5mm)00.04797610.0582780.0810153
INF2Developing inflorescences (1-1.5 cm)000.05600750.0369957
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.0414020.1222050.07972510.359589
CAR5Developing grain, bracts removed (5 DPA)000.05451190.0435517
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_75563






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75563.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75563.3NoneAvailableAvailablecontig_68222 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g51130.1 -1 3e-40 79 33/87 (38%) 13101.m05327 protein transposon protein, putative, unclassified
TAIR PP10 AT2G04865.1 -1 3e-19 61 27/79 (34%) Aminotransferase-like, plant mobile domain family protein | chr2:1712149-1714599 FORWARD LENGTH=667