MLOC_75555 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains431.82344.156344.145445.779
LEAShoots from the seedlings (10 cm shoot stage)164.512123.797142.416138.794
INF1Young developing inflorescences (5mm)196.312213.81224.937219.131
INF2Developing inflorescences (1-1.5 cm)136.519166.062187.93219.868
ROORoots from the seedlings (10 cm shoot stage)233.372326.144365.994483.915
NODDeveloping tillers at six leaf stage, 3rd internode294.122205.984181.233695.965
CAR5Developing grain, bracts removed (5 DPA)178.948221.413199.03252.932
CAR15Developing grain, bracts removed (15 DPA)66.08566.376860.8092185.402



CDS Structure of MLOC_75555






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75555.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251000.1NoneNoneNoneNone
MLOC_75555.1CUST_6523_PI427708080AvailableAvailablecontig_68202 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g15170.1 -2 3e-31 114 53/73 (73%) 13108.m01621 protein ATP synthase epsilon chain, mitochondrial, putative, expressed
TAIR PP10 AT1G51650.1 -2 6e-28 103 47/65 (72%) ATP synthase epsilon chain, mitochondrial | chr1:19152680-19153641 FORWARD LENGTH=70